RNA structures (DSSR)

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Subject / Started by	Replies / Views	Last post
Junction definition Started by lijun	4 Replies 1820 Views	March 07, 2019, 02:23:01 pm by lijun
no nucleotide in some structures Started by shuxiang	2 Replies 1453 Views	February 11, 2019, 11:41:21 am by shuxiang
Stems of junction structure have only one base pair Started by lijun	3 Replies 1745 Views	January 16, 2019, 01:08:16 pm by xiangjun
Stacking parameters Started by spoblete	1 Replies 1733 Views	December 27, 2018, 02:08:45 pm by xiangjun
Non canonical RNA pairs in bpseq format Started by jaswinder.singh	1 Replies 7137 Views	December 01, 2018, 09:59:40 am by xiangjun
Web 3DNA Error Started by Pierred	3 Replies 6359 Views	October 18, 2018, 01:43:45 pm by Pierred
Seeking help with DSSR (Base Pair and Stacking) Started by mahfuz	6 Replies 2831 Views	October 15, 2018, 12:29:15 pm by mahfuz
DSSR Download and Installation Started by se3DNAcct	1 Replies 2032 Views	September 26, 2018, 06:48:51 pm by xiangjun
Analysis crashes: MD trajectory of abasic site in RNA Started by Marcel Heinz	10 Replies 3781 Views	September 06, 2018, 01:48:00 pm by xiangjun
Minimal required cif keys (cif files created with biopython not working) Started by Bernhard10	5 Replies 2202 Views	September 06, 2018, 09:54:01 am by xiangjun
significance of character "P" Started by laura savana	2 Replies 2002 Views	August 28, 2018, 02:32:56 pm by laura savana
strange residue number after dssr --view option Started by shuxiang	2 Replies 2156 Views	August 06, 2018, 05:40:26 pm by shuxiang
automatically count the number of nucleotides involved in RNA helices Started by elodiem	3 Replies 2055 Views	July 27, 2018, 09:23:28 am by xiangjun
List only base pairs in output Started by Llewellyn	2 Replies 2086 Views	July 26, 2018, 01:41:41 pm by Llewellyn
include non-cannonical base-pairing in DBN output? Started by jms89	3 Replies 2313 Views	June 09, 2018, 07:43:19 pm by xiangjun
Water H-Bonding with surrounding residues Started by kanavkalra	3 Replies 2236 Views	May 20, 2018, 06:21:41 pm by xiangjun
DSSR-enhanced visualization web server cannot display ribosome structures? Started by shuxiang	4 Replies 2379 Views	May 17, 2018, 12:58:25 pm by shuxiang
How to display RNA secondary structure with & in forna? Started by shuxiang	2 Replies 2183 Views	May 15, 2018, 11:35:00 am by shuxiang
Opinion about the DSSR performance compared with the new "CompAnnotate". Started by martingb	4 Replies 2850 Views	April 10, 2018, 04:43:24 pm by martingb
Centre of Mass Pseudodihedral Angle Started by hijibijbij	3 Replies 2504 Views	April 03, 2018, 11:29:30 am by xiangjun

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊], Principal Investigator of the NIH grant R01GM096889
Dr. Lu is currently affiliated with the Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.

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