RNA structures (DSSR)

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DSSR-NAR paper

Scripts and data files for reproducing results reported in the DSSR-NAR paper.

Moderator: xiangjun

19 Posts
19 Topics

Last post by xiangjun
in RNA cartoon-block repres...
on July 24, 2015, 02:18:56 pm

DSSR-Jmol integration

Topics related to the DSSR-Jmol integration for enhanced visualization of nucleic acid structures.

Moderator: xiangjun

5 Posts
5 Topics

Last post by xiangjun
in cover image
on June 30, 2017, 01:56:36 pm

Subject / Started by	Replies / Views	Last post
DSSR: Dissecting the Spatial Structure of RNA Started by xiangjun	0 Replies 68237 Views	March 28, 2015, 12:42:38 pm by xiangjun
DSSR release history Started by xiangjun	0 Replies 63047 Views	October 31, 2013, 11:24:21 am by xiangjun
torsion angle distribution in C2'-endo RNA Started by zhhxu	4 Replies 33192 Views	June 29, 2020, 10:56:30 am by zhhxu
dssr did not recognize some canonical nucleotide in 6nd4 chain 2 Started by zcx	3 Replies 46937 Views	October 22, 2021, 05:07:20 pm by xiangjun
dssr stdin Started by zcx	3 Replies 36438 Views	June 08, 2020, 03:51:39 pm by zcx
Analyzing more than 900 RNA structures Started by zainab fadhil	1 Replies 26671 Views	December 19, 2016, 09:56:24 pm by xiangjun
Where to download the DSSR basic version Started by Ying	4 Replies 49453 Views	September 13, 2021, 10:16:10 am by xiangjun
How to get DSSR up and running? Started by Ying	2 Replies 48903 Views	September 15, 2021, 01:41:25 pm by Ying
Source distribution/Linux packaging Started by yann.ponty	2 Replies 32585 Views	September 11, 2015, 02:45:18 pm by xiangjun
different get-hbond output Started by xiaoj12	5 Replies 44552 Views	November 21, 2015, 11:45:07 pm by xiangjun
Criteria of Identification of hydrogen bonds Started by xiaoj12	9 Replies 53440 Views	June 10, 2016, 11:03:13 pm by xiangjun
No nucleotides identified from VMD selected ssDNA structure Started by xiaoj12	3 Replies 30793 Views	November 24, 2015, 02:58:02 pm by xiangjun
Further note on DSSR Started by xiangjun	0 Replies 33417 Views	April 25, 2013, 01:13:56 pm by xiangjun
Materials related to the DSSR ACS Biochemistry article on G.A pairs Started by xiangjun	0 Replies 31342 Views	June 07, 2019, 02:48:29 pm by xiangjun
MOVED: Dinucleotide step parameters for "ideal" A-form RNA Started by xiangjun	0 Replies 25239 Views	September 11, 2015, 03:52:08 pm by xiangjun
Proposed changes in DSSR v1.2 Started by xiangjun	0 Replies 27294 Views	December 03, 2014, 02:20:58 pm by xiangjun
Request for comments on DSSR output before v1.0 release Started by xiangjun	2 Replies 33680 Views	January 14, 2014, 11:22:36 am by xiangjun
DSSR: Software for Defining the (Secondary) Structures of RNA Started by xiangjun	0 Replies 43314 Views	March 03, 2013, 10:59:17 pm by xiangjun
What can 3DNA do for RNA structures? Started by xiangjun	0 Replies 37883 Views	March 06, 2012, 08:33:34 pm by xiangjun
A bug with missing right-side type bulges Started by xiangjun	4 Replies 35250 Views	January 10, 2014, 05:51:47 am by febos

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