RNA structures (DSSR)

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DSSR-NAR paper

Scripts and data files for reproducing results reported in the DSSR-NAR paper.

Moderator: xiangjun

19 Posts
19 Topics

Last post by xiangjun
in RNA cartoon-block repres...
on July 24, 2015, 02:18:56 pm

DSSR-Jmol integration

Topics related to the DSSR-Jmol integration for enhanced visualization of nucleic acid structures.

Moderator: xiangjun

5 Posts
5 Topics

Last post by xiangjun
in cover image
on June 30, 2017, 01:56:36 pm

Subject / Started by	Replies / Views	Last post
DSSR release history Started by xiangjun	0 Replies 63117 Views	October 31, 2013, 11:24:21 am by xiangjun
DSSR: Dissecting the Spatial Structure of RNA Started by xiangjun	0 Replies 68306 Views	March 28, 2015, 12:42:38 pm by xiangjun
What can 3DNA do for RNA structures? Started by xiangjun	0 Replies 37939 Views	March 06, 2012, 08:33:34 pm by xiangjun
Proposed changes in DSSR v1.2 Started by xiangjun	0 Replies 27397 Views	December 03, 2014, 02:20:58 pm by xiangjun
MOVED: Dinucleotide step parameters for "ideal" A-form RNA Started by xiangjun	0 Replies 25308 Views	September 11, 2015, 03:52:08 pm by xiangjun
Materials related to the DSSR ACS Biochemistry article on G.A pairs Started by xiangjun	0 Replies 31414 Views	June 07, 2019, 02:48:29 pm by xiangjun
Web DSSR for dissecting the spatial structures of nucleic acids Started by shuxiang	0 Replies 34634 Views	July 29, 2018, 02:16:30 pm by shuxiang
Further note on DSSR Started by xiangjun	0 Replies 33473 Views	April 25, 2013, 01:13:56 pm by xiangjun
DSSR: Software for Defining the (Secondary) Structures of RNA Started by xiangjun	0 Replies 43376 Views	March 03, 2013, 10:59:17 pm by xiangjun
Hydrogen bonds between protein and rna in a docked system Started by thanhlequoc	1 Replies 29045 Views	March 27, 2017, 11:14:31 pm by xiangjun
1ffk missing nucleotides? Started by erikbike	1 Replies 29983 Views	May 21, 2015, 10:13:48 pm by xiangjun
how to define base pair and co-stacking Started by chenjief	1 Replies 34291 Views	August 01, 2019, 11:56:33 am by xiangjun
Stacking parameters (again) Started by spoblete	1 Replies 34437 Views	August 27, 2019, 10:31:45 pm by xiangjun
X3DNA-dssr appening pdb outputs than overwriting Started by raghavbioinfo	1 Replies 27232 Views	September 08, 2016, 12:13:56 pm by xiangjun
Calculate base step parameters manually Started by m.bruist	1 Replies 33985 Views	February 22, 2020, 06:52:57 pm by xiangjun
Running 1ehz example: issue .ntParams Started by jimamoto	1 Replies 33831 Views	February 28, 2020, 06:47:17 pm by xiangjun
Identification of Basepairs - Vertical Seperation Started by Tom Mülller	1 Replies 34143 Views	May 15, 2020, 10:10:12 am by xiangjun
Analyzing more than 900 RNA structures Started by zainab fadhil	1 Replies 26780 Views	December 19, 2016, 09:56:24 pm by xiangjun
A question about DSSR Started by Jian	1 Replies 29118 Views	November 27, 2014, 12:14:00 pm by xiangjun
modified RNA Started by namazi	1 Replies 36674 Views	June 10, 2015, 12:08:06 pm by xiangjun

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