RNA structures (DSSR)

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DSSR-NAR paper Scripts and data files for reproducing results reported in the DSSR-NAR paper. Moderator: xiangjun	19 Posts 19 Topics	Last post by xiangjun in RNA cartoon-block repres... on July 24, 2015, 02:18:56 pm
GA pairs in RNA folding Topics related to the ACS Biochemistry paper on the structural context and spatial arrangements of G·A pairs	32 Posts 7 Topics	Last post by shuxiang in Re: Figure 6. Molecular ... on June 26, 2019, 01:20:18 pm
DSSR-Jmol integration Topics related to the DSSR-Jmol integration for enhanced visualization of nucleic acid structures. Moderator: xiangjun	5 Posts 5 Topics	Last post by xiangjun in cover image on June 30, 2017, 01:56:36 pm
Web-DSSR A web-interface to DSSR for the analysis and annotation of RNA 3D structures Moderator: shuxiang	1 Posts 1 Topics	Last post by shuxiang in Web DSSR for dissecting ... on July 29, 2018, 02:16:30 pm

Subject / Started by	Replies / Views	Last post
DSSR release history Started by xiangjun	0 Replies 9316 Views	October 31, 2013, 11:24:21 am by xiangjun
DSSR: Dissecting the Spatial Structure of RNA Started by xiangjun	0 Replies 8741 Views	March 28, 2015, 12:42:38 pm by xiangjun
"malloc failure" Started by febos	3 Replies 3089 Views	February 01, 2017, 12:45:47 pm by febos
--nmr option with --get-hbond & --analyze Started by amirtaghavi	3 Replies 849 Views	July 27, 2019, 10:00:53 am by xiangjun
1ffk missing nucleotides? Started by erikbike	1 Replies 3687 Views	May 21, 2015, 10:13:48 pm by xiangjun
1h1k secondary structure Started by erikbike	3 Replies 4734 Views	May 21, 2015, 12:25:14 pm by xiangjun
1MZP Started by cigdem	2 Replies 3117 Views	August 23, 2016, 04:31:22 pm by cigdem
A bug with missing right-side type bulges Started by xiangjun	4 Replies 4668 Views	January 10, 2014, 05:51:47 am by febos
a little note about DSSR installation Started by febos	3 Replies 4406 Views	November 19, 2013, 08:49:55 am by xiangjun
A question about base inclination Started by lvelve0901	4 Replies 4159 Views	August 24, 2016, 01:07:15 pm by lvelve0901
A question about DSSR Started by Jian	1 Replies 3535 Views	November 27, 2014, 12:14:00 pm by xiangjun
A small issue on capping interactions Started by Luigi	4 Replies 4801 Views	March 17, 2015, 08:24:43 am by xiangjun
A/B/Z forms Started by Auffinger	2 Replies 5436 Views	August 05, 2013, 08:54:29 am by Auffinger
an issue with bulges Started by febos	2 Replies 5213 Views	December 25, 2013, 03:00:25 pm by xiangjun
Analysis crashes: MD trajectory of abasic site in RNA Started by Marcel Heinz	10 Replies 3781 Views	September 06, 2018, 01:48:00 pm by xiangjun
Analyzing more than 900 RNA structures Started by zainab fadhil	1 Replies 2824 Views	December 19, 2016, 09:56:24 pm by xiangjun
atom-base capping Started by Mohit Chawla	7 Replies 5092 Views	April 04, 2017, 10:27:34 am by Mohit Chawla
automatically count the number of nucleotides involved in RNA helices Started by elodiem	3 Replies 2055 Views	July 27, 2018, 09:23:28 am by xiangjun
Avoiding pairing that cross chains Started by eswright	6 Replies 1018 Views	July 27, 2019, 01:19:34 pm by eswright
B Form to A Form Structures Started by ktucci	1 Replies 3251 Views	March 09, 2017, 02:39:58 pm by xiangjun

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