w3DNA -- web interface to 3DNA

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Details on reproducing results reported in web 3DNA 2.0 (NAR'19 webserver issue)

5 Posts
5 Topics

Last post by xiangjun
in Web 3DNA is highlighted ...
on June 28, 2019, 10:59:26 pm

Subject / Started by	Replies / Views	Last post
Notes on w3DNA v2 Started by xiangjun	4 Replies 321401 Views	December 07, 2018, 10:47:08 am by xiangjun
Analyze multiple models Started by bbobay	0 Replies 402804 Views	April 14, 2023, 10:58:50 am by bbobay
can't open the baselist file error for 2 PDB IDs Started by sowmya	1 Replies 329958 Views	December 25, 2022, 11:49:24 am by xiangjun
Cannot understand what a base pair type means from web-3DNA output Started by sowmya	1 Replies 235975 Views	December 25, 2022, 11:33:44 am by xiangjun
why w3DNA fails to calculate some non-canonical base pairs in structure Started by Ying	3 Replies 272673 Views	September 16, 2021, 11:30:57 am by xiangjun
Is there a time lag between PDB deposits and 'Analysis' use? Started by ry54451	1 Replies 239666 Views	April 16, 2021, 12:24:54 pm by xiangjun
MOVED: composite DNA template length Started by xiangjun	0 Replies 290949 Views	February 18, 2021, 11:09:00 am by xiangjun
Binding site orientation in Composite Started by ab9010	2 Replies 261331 Views	February 11, 2021, 04:34:22 pm by xiangjun
Composite Started by mlowe	2 Replies 343324 Views	February 11, 2021, 04:33:40 pm by xiangjun
Base pair in 3LZ0 not recognised Started by mce1	4 Replies 262162 Views	June 16, 2020, 07:28:00 am by xiangjun
Standard Values for A-, B-, C-DNA on w3DNA Started by ry54451	1 Replies 245723 Views	April 23, 2020, 09:34:04 am by xiangjun
w3dna server update schedule? Started by cllawson	2 Replies 237723 Views	August 09, 2019, 07:42:31 am by cllawson
Fiber pdb not loading in Analysis Started by jenson	9 Replies 429123 Views	July 25, 2019, 11:22:27 am by shuxiang
Web 3DNA 2.0 is up and running Started by shuxiang	0 Replies 248018 Views	December 18, 2018, 09:15:17 pm by shuxiang
Can 3DNA generate PDB files of DNA containing G-T mismatch? Started by Doris	1 Replies 220339 Views	December 05, 2018, 09:27:30 am by xiangjun
Is the w3DNA at Rutgers permanently down? Started by jimkress	3 Replies 241627 Views	October 25, 2016, 10:00:38 am by wolson
helical parameters for damged conformation of the DNA Started by kartheekpitta	3 Replies 244274 Views	October 06, 2016, 10:58:05 am by xiangjun
web-3DNA not running on some pdb entries Started by anjali09	2 Replies 220286 Views	July 11, 2016, 11:35:21 am by anjali09
w3DNA hanging on some structures Started by nb0147	3 Replies 224560 Views	May 17, 2016, 03:39:58 am by nb0147
MOVED: 3DNA can recognise DNA with S atoms? Started by xiangjun	0 Replies 210419 Views	September 24, 2015, 11:31:04 pm by xiangjun

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