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w3DNA -- web interface to 3DNA
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shuxiang
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Composite
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Topic: Composite (Read 338978 times)
mlowe
non-commercial
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Posts: 3
Composite
«
on:
June 24, 2020, 05:57:46 pm »
I am trying the composite feature of web 3DNA 2.0. I would like to use my own "template PDB." However the form appears to be searching rcsb.org. Is there a way to enter my own PDB?
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xiangjun
Administrator
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Posts: 1746
Re: Composite
«
Reply #1 on:
June 24, 2020, 06:23:49 pm »
Thanks for posting your question on the 3DNA Forum.
My understanding is that the templates for the Composite module (on the Web 3DNA 2.0 website) must be from PDB entries. Shuxiang may chime in with more details.
Best regards,
Xiang-Jun
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Dr. Xiang-Jun Lu[律祥俊]
Email: xiangjun@x3dna.org
Homepage:
https://x3dna.org
wDSSR:
https://web.x3dna-dssr.org
GitHub:
https://github.com/x3dna-dssr
xiangjun
Administrator
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Posts: 1746
Re: Composite
«
Reply #2 on:
February 11, 2021, 04:33:40 pm »
Hi,
I have created a brand-new program for template-based modeling of nucleic acid structures, including DNA-protein complexes. Now users can easily specify their own templates via the command-line. This novel modeling program is
distributed as a module of DSSR Pro.
Best regards,
Xiang-Jun
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Dr. Xiang-Jun Lu[律祥俊]
Email: xiangjun@x3dna.org
Homepage:
https://x3dna.org
wDSSR:
https://web.x3dna-dssr.org
GitHub:
https://github.com/x3dna-dssr
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