RNA structures (DSSR)

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Subject / Started by	Replies / Views	Last post
Web DSSR for dissecting the spatial structures of nucleic acids Started by shuxiang	0 Replies 12025 Views	July 29, 2018, 02:16:30 pm by shuxiang
strange residue number after dssr --view option Started by shuxiang	2 Replies 10463 Views	August 06, 2018, 05:40:26 pm by shuxiang
no nucleotide in some structures Started by shuxiang	2 Replies 11527 Views	February 11, 2019, 11:41:21 am by shuxiang
Figure 2. Molecular images of RNA secondary structural motifs incorporating each Started by shuxiang	6 Replies 13421 Views	June 10, 2019, 01:03:27 pm by shuxiang
Figure 1. Comparison of the hydrogen-bonding interactions, chemical structures Started by shuxiang	10 Replies 15926 Views	June 10, 2019, 01:05:43 pm by shuxiang
Figure 3. Scatter plots of the rigid-body components—shear, stretch, and opening Started by shuxiang	1 Replies 8105 Views	June 10, 2019, 01:24:06 pm by shuxiang
Figure 4. Succession of configurations illustrating the rigid-body motions Started by shuxiang	1 Replies 8120 Views	June 14, 2019, 03:11:58 pm by shuxiang
Figure 5. Molecular images illustrating hydrogen bonds (dashed lines) shared Started by shuxiang	1 Replies 9039 Views	June 14, 2019, 03:55:57 pm by shuxiang
strange sequence and dot-bracket notation for dssr output Started by shuxiang	2 Replies 8721 Views	June 21, 2019, 03:31:57 pm by shuxiang
Figure 6. Molecular images of multiplets with two or more modes of G·A Started by shuxiang	6 Replies 18240 Views	June 26, 2019, 01:20:18 pm by shuxiang
Torsion angles Started by sharvey7	1 Replies 11362 Views	July 16, 2015, 02:59:27 pm by xiangjun
Phosphodiester bond length Started by sharanr2	6 Replies 18303 Views	June 10, 2016, 10:21:35 am by xiangjun
DSSR Download and Installation Started by se3DNAcct	1 Replies 12024 Views	September 26, 2018, 06:48:51 pm by xiangjun
Query in 3DNA-DSSR output vs W3DNA output Started by sankaran	1 Replies 8419 Views	February 28, 2021, 10:22:26 am by xiangjun
Turn of Auxiliary File Creation (x3dna-dssr) Started by saladi	8 Replies 19108 Views	March 21, 2018, 11:53:35 pm by xiangjun
x3dna-dssr -h no response Started by rvandamm	1 Replies 7985 Views	January 15, 2021, 09:53:57 pm by xiangjun
X3DNA-dssr appening pdb outputs than overwriting Started by raghavbioinfo	1 Replies 10177 Views	September 08, 2016, 12:13:56 pm by xiangjun
Web 3DNA Error Started by Pierred	3 Replies 16180 Views	October 18, 2018, 01:43:45 pm by Pierred
Bug or feature (?) : residue numbering not understood Started by persalteas	12 Replies 22709 Views	June 01, 2021, 04:53:07 pm by xiangjun
[Solved] Batch-processing structures with analyze -t Started by persalteas	3 Replies 9071 Views	January 06, 2020, 08:23:13 pm by xiangjun

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.

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