RNA structures (DSSR)

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Subject / Started by	Replies / Views	Last post
How to display RNA secondary structure with & in forna? Started by shuxiang	2 Replies 7972 Views	May 15, 2018, 11:35:00 am by shuxiang
DSSR-enhanced visualization web server cannot display ribosome structures? Started by shuxiang	4 Replies 7959 Views	May 17, 2018, 12:58:25 pm by shuxiang
Water H-Bonding with surrounding residues Started by kanavkalra	3 Replies 7288 Views	May 20, 2018, 06:21:41 pm by xiangjun
include non-cannonical base-pairing in DBN output? Started by jms89	3 Replies 7264 Views	June 09, 2018, 07:43:19 pm by xiangjun
List only base pairs in output Started by Llewellyn	2 Replies 7018 Views	July 26, 2018, 01:41:41 pm by Llewellyn
automatically count the number of nucleotides involved in RNA helices Started by elodiem	3 Replies 5248 Views	July 27, 2018, 09:23:28 am by xiangjun
Web DSSR for dissecting the spatial structures of nucleic acids Started by shuxiang	0 Replies 7560 Views	July 29, 2018, 02:16:30 pm by shuxiang
strange residue number after dssr --view option Started by shuxiang	2 Replies 6059 Views	August 06, 2018, 05:40:26 pm by shuxiang
significance of character "P" Started by laura savana	2 Replies 7080 Views	August 28, 2018, 02:32:56 pm by laura savana
Minimal required cif keys (cif files created with biopython not working) Started by Bernhard10	5 Replies 9013 Views	September 06, 2018, 09:54:01 am by xiangjun
Analysis crashes: MD trajectory of abasic site in RNA Started by Marcel Heinz	10 Replies 13031 Views	September 06, 2018, 01:48:00 pm by xiangjun
DSSR Download and Installation Started by se3DNAcct	1 Replies 7479 Views	September 26, 2018, 06:48:51 pm by xiangjun
Seeking help with DSSR (Base Pair and Stacking) Started by mahfuz	6 Replies 9083 Views	October 15, 2018, 12:29:15 pm by mahfuz
Web 3DNA Error Started by Pierred	3 Replies 11687 Views	October 18, 2018, 01:43:45 pm by Pierred
Non canonical RNA pairs in bpseq format Started by jaswinder.singh	1 Replies 12282 Views	December 01, 2018, 09:59:40 am by xiangjun
Stacking parameters Started by spoblete	1 Replies 7564 Views	December 27, 2018, 02:08:45 pm by xiangjun
Stems of junction structure have only one base pair Started by lijun	3 Replies 7932 Views	January 16, 2019, 01:08:16 pm by xiangjun
no nucleotide in some structures Started by shuxiang	2 Replies 7019 Views	February 11, 2019, 11:41:21 am by shuxiang
Junction definition Started by lijun	4 Replies 8907 Views	March 07, 2019, 02:23:01 pm by lijun
Using dssr to analyze PDB containing multiple frames Started by jimamoto	3 Replies 6425 Views	March 08, 2019, 10:45:24 pm by xiangjun

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.

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