RNA structures (DSSR)

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DSSR-NAR paper Scripts and data files for reproducing results reported in the DSSR-NAR paper. Moderator: xiangjun	19 Posts 19 Topics	Last post by xiangjun in RNA cartoon-block repres... on July 24, 2015, 02:18:56 pm
GA pairs in RNA folding Topics related to the ACS Biochemistry paper on the structural context and spatial arrangements of G·A pairs	32 Posts 7 Topics	Last post by shuxiang in Re: Figure 6. Molecular ... on June 26, 2019, 01:20:18 pm
DSSR-Jmol integration Topics related to the DSSR-Jmol integration for enhanced visualization of nucleic acid structures. Moderator: xiangjun	5 Posts 5 Topics	Last post by xiangjun in cover image on June 30, 2017, 01:56:36 pm
Web-DSSR A web-interface to DSSR for the analysis and annotation of RNA 3D structures Moderator: shuxiang	1 Posts 1 Topics	Last post by shuxiang in Web DSSR for dissecting ... on July 29, 2018, 02:16:30 pm

Subject / Started by	Replies / Views	Last post
DSSR: Dissecting the Spatial Structure of RNA Started by xiangjun	0 Replies 8435 Views	March 28, 2015, 12:42:38 pm by xiangjun
DSSR release history Started by xiangjun	0 Replies 9056 Views	October 31, 2013, 11:24:21 am by xiangjun
How to detect very distorted base pair? Started by lvelve0901	2 Replies 37 Views	January 20, 2020, 07:03:32 pm by lvelve0901
[Solved] Batch-processing structures with analyze -t Started by persalteas	3 Replies 100 Views	January 06, 2020, 08:23:13 pm by xiangjun
Wrong junctions Started by lijun	5 Replies 3488 Views	September 30, 2019, 10:39:52 pm by xiangjun
DSSR of 32 bit version Started by lijun	7 Replies 838 Views	August 28, 2019, 12:37:44 pm by xiangjun
Stacking parameters (again) Started by spoblete	1 Replies 564 Views	August 27, 2019, 10:31:45 pm by xiangjun
how to define base pair and co-stacking Started by chenjief	1 Replies 753 Views	August 01, 2019, 11:56:33 am by xiangjun
Noncanonical base pair standards Started by m.bruist	3 Replies 1019 Views	August 01, 2019, 11:30:40 am by xiangjun
Avoiding pairing that cross chains Started by eswright	6 Replies 824 Views	July 27, 2019, 01:19:34 pm by eswright
--nmr option with --get-hbond & --analyze Started by amirtaghavi	3 Replies 671 Views	July 27, 2019, 10:00:53 am by xiangjun
strange exception Started by lvelve0901 « 1 2 »	25 Replies 2966 Views	July 08, 2019, 02:21:16 pm by xiangjun
strange sequence and dot-bracket notation for dssr output Started by shuxiang	2 Replies 824 Views	June 21, 2019, 03:31:57 pm by shuxiang
Using dssr to analyze PDB containing multiple frames Started by jimamoto	3 Replies 1201 Views	March 08, 2019, 10:45:24 pm by xiangjun
Junction definition Started by lijun	4 Replies 1430 Views	March 07, 2019, 02:23:01 pm by lijun
no nucleotide in some structures Started by shuxiang	2 Replies 1066 Views	February 11, 2019, 11:41:21 am by shuxiang
Stems of junction structure have only one base pair Started by lijun	3 Replies 1467 Views	January 16, 2019, 01:08:16 pm by xiangjun
Stacking parameters Started by spoblete	1 Replies 1572 Views	December 27, 2018, 02:08:45 pm by xiangjun
Non canonical RNA pairs in bpseq format Started by jaswinder.singh	1 Replies 6997 Views	December 01, 2018, 09:59:40 am by xiangjun
Web 3DNA Error Started by Pierred	3 Replies 6195 Views	October 18, 2018, 01:43:45 pm by Pierred

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