News:
DSSR v1.9.10-2020apr23 is out, featuring a full-fledged analysis/annotation of G-quadruplexes. SNAP v1.0.6-2019sep30 is out with JSON output.
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DSSR-NAR paper
Scripts and data files for reproducing results reported in the DSSR-NAR paper. Moderator: xiangjun |
19 Posts |
Last post by xiangjun |
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DSSR-Jmol integration
Topics related to the DSSR-Jmol integration for enhanced visualization of nucleic acid structures. Moderator: xiangjun |
5 Posts |
Last post by xiangjun |
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0 Replies
9241 Views |
March 28, 2015, 12:42:38 pmby xiangjun |
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DSSR release history
Started by xiangjun |
0 Replies
9918 Views |
October 31, 2013, 11:24:21 am by xiangjun |
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torsion angle distribution in C2'-endo RNA
Started by zhhxu |
4 Replies
73 Views |
June 29, 2020, 10:56:30 am by zhhxu |
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3DNA/DSSR download issue
Started by dunbrack |
2 Replies
76 Views |
June 20, 2020, 12:23:58 pm by xiangjun |
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dssr stdin
Started by zcx |
3 Replies
134 Views |
June 08, 2020, 03:51:39 pm by zcx |
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1 Replies
146 Views |
May 15, 2020, 10:10:12 am by xiangjun |
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3 Replies
242 Views |
April 24, 2020, 11:11:04 am by brinda.vallat |
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DSSR issue --json and --analyze
Started by jyesselm |
6 Replies
259 Views |
April 20, 2020, 12:45:31 pm by jyesselm |
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3 Replies
387 Views |
March 13, 2020, 09:24:28 am by xiangjun |
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Running 1ehz example: issue .ntParams
Started by jimamoto |
1 Replies
256 Views |
February 28, 2020, 06:47:17 pm by xiangjun |
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Calculate base step parameters manually
Started by m.bruist |
1 Replies
511 Views |
February 22, 2020, 06:52:57 pm by xiangjun |
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Problem using --pair-list options
Started by angel |
4 Replies
436 Views |
February 14, 2020, 10:30:52 am by xiangjun |
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SASA of nucleobases
Started by Mohit Chawla |
3 Replies
360 Views |
February 06, 2020, 04:56:32 pm by xiangjun |
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modified nucleotides incorrect.
Started by tctcab |
5 Replies
404 Views |
February 05, 2020, 10:13:05 pm by tctcab |
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2 Replies
271 Views |
January 20, 2020, 07:03:32 pm by lvelve0901 |
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3 Replies
414 Views |
January 06, 2020, 08:23:13 pm by xiangjun |
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Wrong junctions
Started by lijun |
5 Replies
4571 Views |
September 30, 2019, 10:39:52 pm by xiangjun |
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DSSR of 32 bit version
Started by lijun |
7 Replies
1359 Views |
August 28, 2019, 12:37:44 pm by xiangjun |
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Stacking parameters (again)
Started by spoblete |
1 Replies
1131 Views |
August 27, 2019, 10:31:45 pm by xiangjun |
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how to define base pair and co-stacking
Started by chenjief |
1 Replies
1339 Views |
August 01, 2019, 11:56:33 am by xiangjun |
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Created and maintained by Dr. Xiang-Jun Lu [律祥俊], Principal Investigator of the NIH grant R01GM096889
Dr. Lu is currently affiliated with the Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.