RNA structures (DSSR)

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Subject / Started by	Replies / Views	Last post
non-one-char chain identifiers Started by febos	4 Replies 25414 Views	January 25, 2016, 09:12:00 am by xiangjun
Non canonical RNA pairs in bpseq format Started by jaswinder.singh	1 Replies 29533 Views	December 01, 2018, 09:59:40 am by xiangjun
No nucleotides identified from VMD selected ssDNA structure Started by xiaoj12	3 Replies 22260 Views	November 24, 2015, 02:58:02 pm by xiangjun
no nucleotide in some structures Started by shuxiang	2 Replies 24621 Views	February 11, 2019, 11:41:21 am by shuxiang
negative stretch and opening in RNA pairs Started by acolasanti	1 Replies 25607 Views	March 07, 2014, 01:30:45 pm by xiangjun
MOVED: Dinucleotide step parameters for "ideal" A-form RNA Started by xiangjun	0 Replies 18772 Views	September 11, 2015, 03:52:08 pm by xiangjun
modified RNA Started by namazi	1 Replies 24981 Views	June 10, 2015, 12:08:06 pm by xiangjun
modified nucleotides incorrect. Started by tctcab	5 Replies 43112 Views	February 05, 2020, 10:13:05 pm by tctcab
Minimal required cif keys (cif files created with biopython not working) Started by Bernhard10	5 Replies 36557 Views	September 06, 2018, 09:54:01 am by xiangjun
MD torsions Started by ida	1 Replies 20970 Views	May 03, 2016, 11:00:57 am by xiangjun
Materials related to the DSSR ACS Biochemistry article on G.A pairs Started by xiangjun	0 Replies 20554 Views	June 07, 2019, 02:48:29 pm by xiangjun
Lost info in CT output Started by Sylverlin	1 Replies 22840 Views	November 02, 2014, 10:50:44 am by xiangjun
List only base pairs in output Started by Llewellyn	2 Replies 23531 Views	July 26, 2018, 01:41:41 pm by Llewellyn
list nucleotide/nucleotide contacts involving a phosphate group. Started by auffinger	12 Replies 59908 Views	May 07, 2013, 01:56:40 pm by xiangjun
License issue of DSSR Started by Warren	5 Replies 33438 Views	April 28, 2021, 02:30:10 pm by Warren
Junction definition Started by lijun	4 Replies 26735 Views	March 07, 2019, 02:23:01 pm by lijun
issues in converting pdb to "dot bracket notation" Started by bchetnani	2 Replies 25679 Views	September 14, 2013, 11:30:19 pm by bchetnani
Issue with lattice contacts Started by Luigi	4 Replies 24010 Views	August 17, 2015, 01:03:34 pm by Luigi
Incorrect topology assignment Started by kogucior	9 Replies 45545 Views	May 28, 2021, 09:52:45 pm by xiangjun
include non-cannonical base-pairing in DBN output? Started by jms89	3 Replies 24465 Views	June 09, 2018, 07:43:19 pm by xiangjun