| zph_zp.png |
5007 |
Re: Datasets and scripts for reproducing Figure 5 of the 3DNA NAR03 paper |
September 07, 2012, 02:15:17 pm |
| ZDNA-circle2.png |
165 |
Re: Rebuilding circular Z-DNA |
June 03, 2025, 12:42:43 am |
| ZDNA-circle2.pdb |
113 |
Re: Rebuilding circular Z-DNA |
June 03, 2025, 12:42:43 am |
| ZDNA-circle.png |
188 |
Re: Rebuilding circular Z-DNA |
April 30, 2025, 08:40:24 am |
| ZDNA-circle.pdb |
96 |
Re: Rebuilding circular Z-DNA |
April 30, 2025, 08:40:24 am |
| x3dna_md.out |
3195 |
Ruby scripts for the analysis of MD simulation trajectories |
January 19, 2011, 12:11:44 am |
| wrong-atoms-label.png |
4093 |
Re: Further questions about inter-base angle calculations |
February 27, 2017, 10:38:39 am |
| WebSTAR3D-DSSR.png |
3827 |
Re: Opinion about the DSSR performance compared with the new "CompAnnotate". |
April 10, 2018, 04:29:58 pm |
| w3DNA_logo.gif |
4393 |
Re: Logo |
December 09, 2008, 12:30:12 am |
| W.png |
4212 |
Re: std_base |
March 13, 2014, 01:20:45 pm |
| vdna2.par |
4258 |
Re: Intrinsic Curvature of DNA |
June 03, 2015, 09:58:18 pm |
| vdna.pdb |
4232 |
Re: Intrinsic Curvature of DNA |
June 03, 2015, 09:58:18 pm |
| U106-G215.png |
4344 |
Re: Non canonical RNA pairs in bpseq format |
December 01, 2018, 09:59:40 am |
| twist60-G84-scaled.pdb |
82 |
Re: Rebuilding circular Z-DNA |
June 03, 2025, 12:42:43 am |
| TG-pair.png |
4269 |
Re: Adding a modified or non standard bases in a default library |
November 19, 2019, 01:17:08 pm |
| tech-details.pdf |
3328 |
Re: Local base step parameters |
July 13, 2020, 02:58:12 pm |
| sugar_raw.png |
4463 |
Re: How to make a nice visualization for angle distribution? |
October 12, 2010, 11:30:56 pm |
| slide.csv |
3223 |
Ruby scripts for the analysis of MD simulation trajectories |
January 19, 2011, 12:11:44 am |
| SI32.png |
4326 |
Re: analysis of new bases |
April 20, 2015, 11:57:28 pm |
| s5.png |
4989 |
|
November 02, 2007, 01:10:21 am |
| rot_yz180 |
3167 |
Re: How to control the direction in which the two DNA chains are concatenated |
October 03, 2019, 09:58:19 pm |
| roll_slide.png |
5123 |
Re: Datasets and scripts for reproducing Figure 5 of the 3DNA NAR03 paper |
September 07, 2012, 02:15:17 pm |
| roll.dat |
3361 |
Ruby scripts for the analysis of MD simulation trajectories |
January 19, 2011, 12:11:44 am |
| RNA.out |
1437 |
Re: All Possible Base Pairs |
August 08, 2024, 07:33:33 pm |
| RNA-WC-duplex.pdb |
3122 |
Re: Can 3DNA be used to build a miRNA-target structure? |
November 21, 2012, 12:25:59 pm |
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