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Attachments - xiangjun

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Filename Downloads Message Posted
zph_zp.png 3642 Re: Datasets and scripts for reproducing Figure 5 of the 3DNA NAR03 paper September 07, 2012, 02:15:17 pm
x3dna_md.out 2387 Ruby scripts for the analysis of MD simulation trajectories January 19, 2011, 12:11:44 am
wrong-atoms-label.png 2728 Re: Further questions about inter-base angle calculations February 27, 2017, 10:38:39 am
WebSTAR3D-DSSR.png 2766 Re: Opinion about the DSSR performance compared with the new "CompAnnotate". April 10, 2018, 04:29:58 pm
w3DNA_logo.gif 2945 Re: Logo December 09, 2008, 12:30:12 am
W.png 2951 Re: std_base March 13, 2014, 01:20:45 pm
vdna2.par 2197 Re: Intrinsic Curvature of DNA June 03, 2015, 09:58:18 pm
vdna.pdb 2214 Re: Intrinsic Curvature of DNA June 03, 2015, 09:58:18 pm
U106-G215.png 3035 Re: Non canonical RNA pairs in bpseq format December 01, 2018, 09:59:40 am
TG-pair.png 2649 Re: Adding a modified or non standard bases in a default library November 19, 2019, 01:17:08 pm
tech-details.pdf 2219 Re: Local base step parameters July 13, 2020, 02:58:12 pm
sugar_raw.png 3280 Re: How to make a nice visualization for angle distribution? October 12, 2010, 11:30:56 pm
slide.csv 2415 Ruby scripts for the analysis of MD simulation trajectories January 19, 2011, 12:11:44 am
SI32.png 3001 Re: analysis of new bases April 20, 2015, 11:57:28 pm
s5.png 3664 November 02, 2007, 01:10:21 am
rot_yz180 2145 Re: How to control the direction in which the two DNA chains are concatenated October 03, 2019, 09:58:19 pm
roll_slide.png 3683 Re: Datasets and scripts for reproducing Figure 5 of the 3DNA NAR03 paper September 07, 2012, 02:15:17 pm
roll.dat 2542 Ruby scripts for the analysis of MD simulation trajectories January 19, 2011, 12:11:44 am
RNA-WC-duplex.pdb 2299 Re: Can 3DNA be used to build a miRNA-target structure? November 21, 2012, 12:25:59 pm
RNA-ok-duplex.pdb 2290 Re: Can 3DNA be used to build a miRNA-target structure? November 21, 2012, 12:25:59 pm
propeller.tsv 2441 Ruby scripts for the analysis of MD simulation trajectories January 19, 2011, 12:11:44 am
problem_str.png 2832 Re: Analysis of PDB file April 07, 2012, 09:21:16 am
pred-3d.png 2913 Re: Phosphodiester bond length June 09, 2016, 10:33:54 pm
plus2-missing-pair.png 1117 Re: 'find_pair' and 'analyze' with pdb files of unbound base pairs April 23, 2018, 10:44:48 pm
pd0001_mutok.pdb 2504 October 02, 2007, 10:29:01 pm
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Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.