| RNA-ok-duplex.pdb |
12602 |
Re: Can 3DNA be used to build a miRNA-target structure? |
November 21, 2012, 12:25:59 pm |
| rebuild-base.pdb |
15584 |
Re: Question about axis tilt after reconstruction of B-DNA using x3dna-dssr |
August 01, 2025, 11:47:34 am |
| propeller.tsv |
12466 |
Ruby scripts for the analysis of MD simulation trajectories |
January 19, 2011, 12:11:44 am |
| problem_str.png |
12967 |
Re: Analysis of PDB file |
April 07, 2012, 09:21:16 am |
| pred-3d.png |
15780 |
Re: Phosphodiester bond length |
June 09, 2016, 10:33:54 pm |
| plus2-missing-pair.png |
16047 |
Re: 'find_pair' and 'analyze' with pdb files of unbound base pairs |
April 23, 2018, 10:44:48 pm |
| pd0001_mutok.pdb |
10598 |
|
October 02, 2007, 10:29:01 pm |
| pd0001_5th_mutated_bp_coordinates.txt |
10542 |
|
October 02, 2007, 10:29:01 pm |
| part-2_aligned-rotated.pdb |
4976 |
Re: How to control the direction in which the two DNA chains are concatenated |
October 03, 2019, 09:58:19 pm |
| one-unit.pdb |
4536 |
Re: i-motif: increase the amount of consecutive CYS-CYS+ pairs |
February 13, 2014, 01:00:50 pm |
| one-unit-frame3.pdb |
4589 |
Re: i-motif: increase the amount of consecutive CYS-CYS+ pairs |
February 13, 2014, 01:00:50 pm |
| oct.png |
10887 |
How to identify triplets, quadruplets and higher-order base associations |
August 16, 2012, 11:48:16 pm |
| nt32.png |
6861 |
Re: analysis of new bases |
May 07, 2015, 11:37:49 am |
| nt11.png |
6758 |
Re: analysis of new bases |
May 07, 2015, 11:37:49 am |
| normal_10ns.out |
7309 |
Re: Interpretation of Analysis data from 3DNA |
February 27, 2012, 05:38:36 pm |
| no1014-missing-bp.png |
5608 |
Re: Problem of finding all base pairs in distorted DNA structure using 3DNA |
January 05, 2012, 06:21:52 pm |
| newx.pdb |
16674 |
Re: Rebuild B-DNA |
July 06, 2025, 10:41:34 am |
| new2.pdb |
16692 |
Re: Rebuild B-DNA |
July 06, 2025, 10:41:34 am |
| new2.pdb |
16675 |
Re: Rebuild B-DNA |
July 25, 2025, 11:33:04 am |
| my.pdb |
6004 |
Re: How to fix missing (superfluous) base pairs identified by find_pair? |
January 07, 2018, 11:11:01 am |
| my-3DNA-noFlippedBP.pdb |
5872 |
Re: How to fix missing (superfluous) base pairs identified by find_pair? |
January 07, 2018, 11:11:01 am |
| modified.out |
7259 |
Re: Interpretation of Analysis data from 3DNA |
February 27, 2012, 05:38:36 pm |
| missed-pair.png |
10192 |
Re: local helical axis vector for strongly bent DNA |
June 26, 2017, 02:51:29 pm |
| md-model-no20.png |
17941 |
Re: Problem with x3dna_ensemble analyze |
November 23, 2016, 11:28:30 am |
| long-stacks.txt |
17452 |
Re: All Possible Base Pairs |
August 08, 2024, 07:33:33 pm |
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