Lost info in CT output

[Sylverlin]

Hello Xiang-Jun,

first of all, I think you will be glad that we cited DSSR in our poster at BIBM 2014 (Template-Based Prediction of Ribosomal RNA Secondary Structure), currently hanging on a panel in Belfast and to be published in the Workshop & Poster proceedings.

I have, however, run into a problem: in CT format, on PDB entry 4CXC, the '#' sign and descriptors to the right of it are missing. We do miss them. Is there an option to turn them back on?

Thanks!

Jan Hajic

[xiangjun]

Hi Jan Hajic,

Glad to hear yet another citation to DSSR! If possible, please send me a PDF copy of your BIBM 2014 poster. So far I am aware of two formal papers mentioning specifically DSSR.

Regarding extra information after '#' in .ct (and .bpseq) output, it is deleted by default since I noticed that some parsers won't work with such additional columns. However, with the --more option, you can still get back what you miss.

HTH,

Xiang-Jun