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Attachments - xiangjun

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Filename Downloads Message Posted
zph_zp.png 15830 Re: Datasets and scripts for reproducing Figure 5 of the 3DNA NAR03 paper September 07, 2012, 02:15:17 pm
ZDNA-circle2.png 18413 Re: Rebuilding circular Z-DNA June 03, 2025, 12:42:43 am
ZDNA-circle2.pdb 10625 Re: Rebuilding circular Z-DNA June 03, 2025, 12:42:43 am
ZDNA-circle.png 18687 Re: Rebuilding circular Z-DNA April 30, 2025, 08:40:24 am
ZDNA-circle.pdb 10543 Re: Rebuilding circular Z-DNA April 30, 2025, 08:40:24 am
x3dna_md.out 13803 Ruby scripts for the analysis of MD simulation trajectories January 19, 2011, 12:11:44 am
wrong-atoms-label.png 10615 Re: Further questions about inter-base angle calculations February 27, 2017, 10:38:39 am
WebSTAR3D-DSSR.png 10104 Re: Opinion about the DSSR performance compared with the new "CompAnnotate". April 10, 2018, 04:29:58 pm
w3DNA_logo.gif 25662 Re: Logo December 09, 2008, 12:30:12 am
W.png 11309 Re: std_base March 13, 2014, 01:20:45 pm
vdna2.par 6885 Re: Intrinsic Curvature of DNA June 03, 2015, 09:58:18 pm
vdna.pdb 7136 Re: Intrinsic Curvature of DNA June 03, 2015, 09:58:18 pm
U106-G215.png 10727 Re: Non canonical RNA pairs in bpseq format December 01, 2018, 09:59:40 am
twist60-G84-scaled.pdb 10402 Re: Rebuilding circular Z-DNA June 03, 2025, 12:42:43 am
TG-pair.png 12536 Re: Adding a modified or non standard bases in a default library November 19, 2019, 01:17:08 pm
tech-details.pdf 12944 Re: Local base step parameters July 13, 2020, 02:58:12 pm
sugar_raw.png 14075 Re: How to make a nice visualization for angle distribution? October 12, 2010, 11:30:56 pm
slide.csv 13714 Ruby scripts for the analysis of MD simulation trajectories January 19, 2011, 12:11:44 am
SI32.png 8697 Re: analysis of new bases April 20, 2015, 11:57:28 pm
s5.png 18680 November 02, 2007, 01:10:21 am
rot_yz180 6164 Re: How to control the direction in which the two DNA chains are concatenated October 03, 2019, 09:58:19 pm
roll_slide.png 16086 Re: Datasets and scripts for reproducing Figure 5 of the 3DNA NAR03 paper September 07, 2012, 02:15:17 pm
roll.dat 13957 Ruby scripts for the analysis of MD simulation trajectories January 19, 2011, 12:11:44 am
RNA.out 19103 Re: All Possible Base Pairs August 08, 2024, 07:33:33 pm
RNA-WC-duplex.pdb 13723 Re: Can 3DNA be used to build a miRNA-target structure? November 21, 2012, 12:25:59 pm
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Funded by the NIH R24GM153869 grant on X3DNA-DSSR, an NIGMS National Resource for Structural Bioinformatics of Nucleic Acids

Created and maintained by Dr. Xiang-Jun Lu, Department of Biological Sciences, Columbia University