RNA structures (DSSR)

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Subject / Started by	Replies / Views	Last post
Turn of Auxiliary File Creation (x3dna-dssr) Started by saladi	8 Replies 5189 Views	March 21, 2018, 11:53:35 pm by xiangjun
discarded nucleotides in json output Started by ICdB	2 Replies 2430 Views	March 08, 2018, 05:23:57 pm by ICdB
brackets in DNA-RNA pairing Started by ICdB	8 Replies 3559 Views	January 15, 2018, 01:17:15 pm by xiangjun
Chain names in DSSR JSON output for PDB Biological Assemblies Started by chemikeris	4 Replies 2887 Views	December 19, 2017, 01:30:02 pm by xiangjun
running DSSR in windows Started by cokiest	3 Replies 2717 Views	December 12, 2017, 12:56:43 pm by cokiest
Can DSSR detect stacking interaction between ligand and nucleic acid Started by lvelve0901	2 Replies 2653 Views	November 17, 2017, 09:15:08 am by xiangjun
Definition of Helix Form Started by lvelve0901	5 Replies 4489 Views	November 13, 2017, 02:39:09 pm by xiangjun
General questions of H-bond section in DSSR Started by lvelve0901	7 Replies 4198 Views	November 13, 2017, 02:01:21 pm by xiangjun
Bulge motif Started by lvelve0901	4 Replies 3818 Views	November 13, 2017, 11:07:40 am by lvelve0901
FRABASE Started by lvelve0901	2 Replies 3001 Views	November 13, 2017, 10:06:40 am by lvelve0901
human telomeric g quadruplex - base stacking energy Started by bciezah1	2 Replies 3046 Views	November 13, 2017, 08:58:12 am by bciezah1
Can DSSR detect nucleic acid ligand interaction Started by lvelve0901	7 Replies 3612 Views	October 31, 2017, 11:29:22 pm by xiangjun
Odd output for G-quadruplex structure Started by jms89	3 Replies 3374 Views	October 20, 2017, 01:22:48 pm by xiangjun
DSSR multiplets Started by febos	4 Replies 4147 Views	October 08, 2017, 02:25:35 pm by febos
Groove width distance in DSSR Started by lvelve0901	15 Replies 9333 Views	September 15, 2017, 08:43:33 pm by xiangjun
Quantifying base stacking interactions Started by chubetty	1 Replies 2594 Views	August 17, 2017, 03:30:03 pm by xiangjun
How to look for abasic site using DSSR Started by lvelve0901	3 Replies 3610 Views	May 01, 2017, 11:35:39 pm by xiangjun
Can we output helix-junction-helix structure using DSSR Started by lvelve0901	1 Replies 3053 Views	April 28, 2017, 03:39:23 pm by xiangjun
atom-base capping Started by Mohit Chawla	7 Replies 5092 Views	April 04, 2017, 10:27:34 am by Mohit Chawla
Hydrogen bonds between protein and rna in a docked system Started by thanhlequoc	1 Replies 3072 Views	March 27, 2017, 11:14:31 pm by xiangjun

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊], Principal Investigator of the NIH grant R01GM096889
Dr. Lu is currently affiliated with the Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.

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