RNA structures (DSSR)

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Subject / Started by	Replies / Views	Last post
Documentation of the Json output fields ? Started by persalteas	3 Replies 3114 Views	March 13, 2020, 09:24:28 am by xiangjun
Running 1ehz example: issue .ntParams Started by jimamoto	1 Replies 2298 Views	February 28, 2020, 06:47:17 pm by xiangjun
Calculate base step parameters manually Started by m.bruist	1 Replies 2609 Views	February 22, 2020, 06:52:57 pm by xiangjun
Problem using --pair-list options Started by angel	4 Replies 2971 Views	February 14, 2020, 10:30:52 am by xiangjun
SASA of nucleobases Started by Mohit Chawla	3 Replies 2611 Views	February 06, 2020, 04:56:32 pm by xiangjun
modified nucleotides incorrect. Started by tctcab	5 Replies 3606 Views	February 05, 2020, 10:13:05 pm by tctcab
[Solved] Batch-processing structures with analyze -t Started by persalteas	3 Replies 2676 Views	January 06, 2020, 08:23:13 pm by xiangjun
Wrong junctions Started by lijun	5 Replies 7886 Views	September 30, 2019, 10:39:52 pm by xiangjun
DSSR of 32 bit version Started by lijun	7 Replies 4451 Views	August 28, 2019, 12:37:44 pm by xiangjun
Stacking parameters (again) Started by spoblete	1 Replies 3010 Views	August 27, 2019, 10:31:45 pm by xiangjun
how to define base pair and co-stacking Started by chenjief	1 Replies 3349 Views	August 01, 2019, 11:56:33 am by xiangjun
Noncanonical base pair standards Started by m.bruist	3 Replies 3935 Views	August 01, 2019, 11:30:40 am by xiangjun
Avoiding pairing that cross chains Started by eswright	6 Replies 3830 Views	July 27, 2019, 01:19:34 pm by eswright
--nmr option with --get-hbond & --analyze Started by amirtaghavi	3 Replies 3881 Views	July 27, 2019, 10:00:53 am by xiangjun
strange exception Started by lvelve0901 « 1 2 »	25 Replies 11390 Views	July 08, 2019, 02:21:16 pm by xiangjun
Figure 6. Molecular images of multiplets with two or more modes of G·A Started by shuxiang	6 Replies 6087 Views	June 26, 2019, 01:20:18 pm by shuxiang
strange sequence and dot-bracket notation for dssr output Started by shuxiang	2 Replies 3104 Views	June 21, 2019, 03:31:57 pm by shuxiang
Figure 5. Molecular images illustrating hydrogen bonds (dashed lines) shared Started by shuxiang	1 Replies 2902 Views	June 14, 2019, 03:55:57 pm by shuxiang
Figure 4. Succession of configurations illustrating the rigid-body motions Started by shuxiang	1 Replies 2439 Views	June 14, 2019, 03:11:58 pm by shuxiang
Figure 3. Scatter plots of the rigid-body components—shear, stretch, and opening Started by shuxiang	1 Replies 2455 Views	June 10, 2019, 01:24:06 pm by shuxiang

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.

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