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RNA structures (DSSR) / A question about DSSR
« on: November 27, 2014, 01:03:28 am »
Dear Xiang-Jun,

I encountered a problem when I used DSSR for extracting the 2D structure of 3ZEX from its pdb file.

I issued the following command:
x3dna-dssr -i=3ZEX.pdb -o=3ZEX.dssr

Then I found that the '3ZEX.pdb' file contains totally 4200 nucleotides, while the '3ZEX.dssr' file concerns only 4177 nucleotides.

Thanks in advance!

Best regards

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.