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Messages - adolfo

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Dear Xiang-Jun,
thanks for your response. Could you share some steps to the utility in 3DNA which can take P atoms (see 22 CG B-DNA structure in attachment) and reconstruct a full atomistic structure based on a CG model. I would really appreciate some help as the wDNA does not support such right away structure loading.
best,
adolfo

2
Dear all,
I am new in this community. Here my question, will it be possible get global helical parameters (e.g. mino/major groove, pitch, rise,..) for a coarse grained double-helix DNA structure using only the P atoms for each residue?
Thanks for your help!
Adolfo

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊], Principal Investigator of the NIH grant R01GM096889
Dr. Lu is currently affiliated with the Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.