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Topics - shvelarde

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Dear Professor Xiang-Jun,

I found this old post (http://forum.x3dna.org/feature-requests/trajectory-over-time/) regarding the analysis of an entire trajectory from MDs.

In that post your response was: 3DNA -- you may want to try the x3dna_ensemble Ruby script...
                                                   using do_x3dna and 
                                                   DSSR -- there is no similar functionality yet

Given that do_x3dna seems to be outdated, I was wondering if still DSSR can not handle entire trajectories from MDs.

Also, I would like to ask, if I have a complete trajectory in some binary format and I convert such trajectory to a pdb file, DSSR would be able to
analyze the trajectory? The web version of DSSR seems to handle trajectories for around 50 frames...


Thanks a lot in advance

S h.v

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊], Principal Investigator of the NIH grant R01GM096889
Dr. Lu is currently affiliated with the Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.