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w3DNA -- web interface to 3DNA / w3DNA hanging on some structures
« on: May 12, 2016, 06:53:40 am »

I've been using w3DNA to analyse a family of structures (very useful and straightforward, thank you very much). However, it is just hanging with some of the structures.

They have non-natural bases in them, but this can't be the only reason, as I have two chemically identical structures in very slightly different conformations, one runs fine and the other hangs forever.

Any thoughts would be much appreciated,


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The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.