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Topics - shasha

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General discussions (Q&As) / Major and Minor Groove Widths.
« on: July 31, 2015, 01:50:55 am »
Hi there.

I am an undergraduate student currently doing my final year project on structural analysis of nucleic acids sequence.
My project is mainly focus on the effect of major and minor groove of dna for dna-protein interaction.

I'm using w3dna server to analyse nucleic acid sequences.
My problem is I don't understand on how to interpret the result for major and minor groove widths.
I would like to know,based on the result that I've received,the major and minor groove widths,
does the width have any effect on protein binding.

Attach herewith is the results that I've received.

Thankyou Sir

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.