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General discussions (Q&As) / Missing files from analyze?
« on: April 23, 2012, 04:01:32 pm »
I'm new to using 3DNA, and I'm trying to analyze a hairpin RNA. I ran my .pdb file through find_pair in order to generate the .inp file for analyze, however, when I run analyze, I don't get all the output files I'm supposed to. It only generates sample.out, auxiliary.par, bp_helical.par, bp_step.par, and ref_frames.dat. The file I really want, stacking, is missing.
Right now I'm using a Mac (10.6.
with 3DNA v2.1beta (downloaded Apr 20). Does anyone have any ideas why I'm missing these files? Do I need to install other programs before they'll work?
Thanks!
Right now I'm using a Mac (10.6.
with 3DNA v2.1beta (downloaded Apr 20). Does anyone have any ideas why I'm missing these files? Do I need to install other programs before they'll work?Thanks!