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General discussions (Q&As) / Continuous polymer
« on: December 02, 2008, 01:11:48 pm »
Dear all,
I am trying to build a continuous polymer of A-DNA from a 8 base pair structure in a crystal.
In fact, using the rebuild I have managed to create a 32 bp structure (analyse the pdb, changed the bp_step file and rebuild -atomic).
However, I would like to know if it is possible to build such a structure but keeping the ions and waters (around the helix) that I have in my original pdb?
I would really appreciate your help.
Thanks in advance for your replies.
Regards,
Ricardo
I am trying to build a continuous polymer of A-DNA from a 8 base pair structure in a crystal.
In fact, using the rebuild I have managed to create a 32 bp structure (analyse the pdb, changed the bp_step file and rebuild -atomic).
However, I would like to know if it is possible to build such a structure but keeping the ions and waters (around the helix) that I have in my original pdb?
I would really appreciate your help.
Thanks in advance for your replies.
Regards,
Ricardo