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Messages - tanashree

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I want to analyze the base-pair parameters of 13 mer DNA double helix. I have one modified base Thymine Glycol in my strand.

I added the name in baselist.dat I am using 2.0 version.  Also, I kept the Atomic_TG.PDB file in config folder as shown for 5MC modification.  When I tried to analyze program is analyzing just for the 10 base pairs and not all 13.

I am attaching DNA duplex file and separate modified base file and also the .dat file in config folder

Thanks & Regards,
Tanashreee

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.