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RNA structures (DSSR) / Re: PyMOL Mac error
« on: February 03, 2017, 03:57:55 pm »
Hi Gabrielle,
I get the same error with the following setup:
- $PATH modified in ~/.bashrc to include x3dna-dssr directory
- launching MacPyMOL from the dock, which unfortunately doesn't read my ~/.bashrc
The following setups work:
- launch /Applications/MacPyMOL.app/Contents/MacOS/MacPyMOL from a terminal
- copy x3dna-dssr to /usr/bin and launch MacPyMOL from dock
- modify os.environ["PATH"] in ~/.pymolrc
Hope one of these options work for you.
You can verify PATH on the PyMOL command line:
Thomas
I get the same error with the following setup:
- $PATH modified in ~/.bashrc to include x3dna-dssr directory
- launching MacPyMOL from the dock, which unfortunately doesn't read my ~/.bashrc
The following setups work:
- launch /Applications/MacPyMOL.app/Contents/MacOS/MacPyMOL from a terminal
- copy x3dna-dssr to /usr/bin and launch MacPyMOL from dock
- modify os.environ["PATH"] in ~/.pymolrc
Hope one of these options work for you.
You can verify PATH on the PyMOL command line:
Code: [Select]
PyMOL>import os
PyMOL>print os.getenv('PATH')
Thomas