DNA Rotation

[lrush88]

Dr. Xiang-Jun Lu,

I am running MD simulations with DNA, and I am using your program to calculate the deformation energy and to generate quality images from applied motions. I am having problems with the images that are generated, because they are rotating after some of the runs so I cannot see exactly what is happening to the DNA molecule.

                                                                    Thank you,
                                                                    L. E. Rush Jr.

[xiangjun]

Thanks for using 3DNA. I am glad that you are taking advantage the visualization part of 3DNA: the other day, I blogged on blocview wondering why it has not been used that much.

Could you be more specific? Which command and options did you use? Preferably with a reproducible example?

Xiang-Jun