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Messages - edeveaud

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1
Bug reports / lib/readme inscorect URL
« on: February 12, 2019, 04:32:18 am »
Hello,

lib/README says that trollrop should be downloaded from http://gitorious.org/trollop/mainline/blobs/raw/master/lib/trollop.rb,
while post http://forum.x3dna.org/md-simulations/ruby-scripts-for-the-analysis-of-md-simulation-trajectories/msg538/#msg538 says from http://trollop.rubyforge.org/

trollrop is available from https://rubygems.org/gems/trollop/versions/

any recommendation about specific version to use ? v1.16.2 or newer version will fit the requirements ?

Eric

2
Bug reports / x3dna_setup :: Unkown shell zsh
« on: February 11, 2019, 11:29:58 am »
FYI

Code: [Select]
bigmess:x3dna-v2.4/bin > ./x3dna_setup -h
Unkown shell zsh

zsh env var settings is the same than sh familly shells
and rcfile is .zshrc or .zshprofile

3
Bug reports / x3dna-v2.4 :: checks for x2dn-v2.3 for homedir
« on: February 11, 2019, 11:23:17 am »
looking at get_3dna_homedir in app_fncs.c

when X3DNA env var not defined, it set homedir to $HOME/x3dna-v2.3/ or $HOMEDRIVE/x3dna-v2.3/



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Funded by the NIH R24GM153869 grant on X3DNA-DSSR, an NIGMS National Resource for Structural Bioinformatics of Nucleic Acids

Created and maintained by Dr. Xiang-Jun Lu, Department of Biological Sciences, Columbia University