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Messages - glx55483

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General discussions (Q&As) / build a DNA triangle for Gromacs
« on: April 17, 2018, 10:06:25 am »
Dear Dr. Lu,

I would like to use 3DNA to construct a DNA triangle (as shown in the attached picture) .
In the 3DNA software, can we manually input the coordinates of the central point of each DNA double helix so that they are placed in a specific position? If not, how can the double helix be translated to a specific placement? Also, can such a triangular structure be realized in 3DNA?

Thanks in advance.
Luxuan Guo

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Funded by the NIH R24GM153869 grant on X3DNA-DSSR, an NIGMS National Resource for Structural Bioinformatics of Nucleic Acids

Created and maintained by Dr. Xiang-Jun Lu, Department of Biological Sciences, Columbia University