Messages

1

General discussions (Q&As) / Re: Adding a modified or non standard bases in a default library

« on: November 20, 2019, 11:58:38 am »

Dear Prof. xiangjun, thanks for your suggestion. It worked with do_x3dna VMD plugin.

Thanks,
Tanashree

2

General discussions (Q&As) / Re: Adding a modified or non standard bases in a default library

« on: November 20, 2019, 08:45:56 am »

Thanks, Prof. xiangjun for your prompt reply. I tried with the changes you suggested and it worked. The modified base was considered as t. Now another doubt is I have to run these calculations for multiple PDB files at a time. I guess analyze option is overwriting the file names wehn I am trying to run in for loop and I could not find any option to give the output file name after analyze command. 

Thanks,
Tanashree