Messages

1

General discussions (Q&As) / Re: Major and Minor Groove Widths.

« on: August 05, 2015, 01:53:17 am »

Thanks sir.

Can i have the user manual for description of each type of parameter because the manual is apparently not available from the link.

2

General discussions (Q&As) / Re: Major and Minor Groove Widths.

« on: August 03, 2015, 11:50:30 pm »

1) What is dinucleotide steps ?

2) From the results, there were P-P and Refined. can you explain on this ?

3

General discussions (Q&As) / Re: Major and Minor Groove Widths.

« on: August 03, 2015, 12:23:43 am »

Thank you for your kind reply on the question.The first article cannot be access.

From the result provided,from my understanding,the one in pink colour column is my DNA sequence.
What about the character in yellow colour column ?

4

General discussions (Q&As) / Major and Minor Groove Widths.

« on: July 31, 2015, 01:50:55 am »

Hi there.

I am an undergraduate student currently doing my final year project on structural analysis of nucleic acids sequence.
My project is mainly focus on the effect of major and minor groove of dna for dna-protein interaction.

I'm using w3dna server to analyse nucleic acid sequences.
My problem is I don't understand on how to interpret the result for major and minor groove widths.
I would like to know,based on the result that I've received,the major and minor groove widths,
does the width have any effect on protein binding.

Attach herewith is the results that I've received.

Thankyou Sir