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Messages - raist

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General discussions (Q&As) / Re: 3DNA ppc64 GNU/linux architecture
« on: March 07, 2008, 04:32:07 am »
Dear Xiang-Jun,
I'm sorry for not replying earlier and more so that I don't have an account to offer you on these machines. If it were up to me you would already have an ccount as I have had your 1998 PNAS paper as reference for all my thesis and i've been using 3DNA to analyze, rebuild and do all kind of things to DNA.
Unfortunately, per policies of the barcelona supercomputer center, an account cannot be made on the Marenostrum (that's the supercomputer where I would like to run 3DNA for on flight analysis of MD trajectories). Support at Marenostrum have told me that they could compile it and erase the source code signing the necessary papers to ensure this would be done.

I understand your policies and also theirs and I understand that probably we'll have to wait a bit longer until this machines are more easily available.

Thank you,
Alberto

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General discussions (Q&As) / 3DNA ppc64 GNU/linux architecture
« on: February 25, 2008, 02:46:27 am »
Hi Xiang-Jun and members of the forum,
I've been running 3DNA for some years now on local machines and I find it very useful, now I would like to do the analysis on a supercomputer facility with the following specifications:

      OS : Linux SuSE 9 with SP3,
      Architecture : ppc64 GNU/Linux

Do you think it could be possible to obtain binaries for these specifications?
Thanks a lot,
Alberto

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Funded by the NIH R24GM153869 grant on X3DNA-DSSR, an NIGMS National Resource for Structural Bioinformatics of Nucleic Acids

Created and maintained by Dr. Xiang-Jun Lu, Department of Biological Sciences, Columbia University