Show Posts

This section allows you to view all posts made by this member. Note that you can only see posts made in areas you currently have access to.


Netiquette · Download · News · Gallery · Homepage · DSSR Manual · G-quadruplexes · DSSR-Jmol · DSSR-PyMOL · DSSR Licensing · Video Overview· RNA Covers

Messages - Lira

Pages: [1]
1
General discussions (Q&As) / Re: 3DNA setup at Linux
« on: September 01, 2011, 07:37:27 pm »
Hi Xiang-Jun Lu,

in your forum I saw a problem with setup script for X3DNA.


"Error Running X3DNA_setup script

by corgan » Mon Feb 01, 2010 3:50 pm

Hello,

I am trying to install 3DNA on my Windows XP machine. I downloaded the Cygwin binary and followed the instructions... when I get to the intruction that says type "x3dna_setup" nothing happens. I then try to run it as a perl script and I get the following error messag:
"C:Documents and SettingsusernameDesktopX3DNAbin>perl.exe x3dna_setup
Use of uninitialized value $_[0] in substitution (s///) at C:/Perl/lib/File/Base
name.pm line 338.
fileparse(): need a valid pathname at x3dna_setup line 13"

Any help would be greatly appreciated!

-Corgan
corgan Posts: 2Joined: Mon Feb 01, 2010 2:23 pm"



# I added the next lines to my .bashrc

export SHELL="/bin/bash"
export X3DNA=/home/lira/x3dna
export PATH=/home/lira/x3dna/bin:$PATH


/lira  #  is my directory and

/x3dna # directory where is allocated the program

running under Cygwin

It works.

Bye.

Lira

Pages: [1]

Funded by the NIH R24GM153869 grant on X3DNA-DSSR, an NIGMS National Resource for Structural Bioinformatics of Nucleic Acids

Created and maintained by Dr. Xiang-Jun Lu, Department of Biological Sciences, Columbia University