1
General discussions (Q&As) / Re: DNA Structure prediction with a heteroatom !
« on: October 15, 2010, 01:36:22 pm »
Thank you to both temizna and xiangjun. Will get back to you once I get a progress !
Q&As related to x3DNA-DSSR; an online community for DNA/RNA structural bioinformatics x3DNA-DSSR · w3DNA
Show Posts
This section allows you to view all posts made by this member. Note that you can only see posts made in areas you currently have access to.
Netiquette · Download · News · Gallery · G-quadruplexes · DSSR-Jmol · DSSR-PyMOL · Video Overview · DSSR v2.5.2 (DSSR Manual) · Homepage
Pages: [1]
2
General discussions (Q&As) / DNA Structure prediction with a heteroatom !
« on: October 10, 2010, 12:49:36 pm »
Let me introduce myself as Muthukumaran doing my Masters in Indian Institute of Technology.
I'm currenlty interested to predict the 3 dimensional structure of double stranded DNA (30 mer). I
found your software 3DNA. Quite impressive. But, I'm interested to build the 3D structure of the
DNA with a heteroatom which is a dye in my case. Can 3DNA be used to accomplish
the task ? We have a NMR structure of the DNA with the dye but thats 20 mer. Is there a way to
cut n paste the dye to the predicted 30 mer from the NMR using any tool ? Thank you
I'm currenlty interested to predict the 3 dimensional structure of double stranded DNA (30 mer). I
found your software 3DNA. Quite impressive. But, I'm interested to build the 3D structure of the
DNA with a heteroatom which is a dye in my case. Can 3DNA be used to accomplish
the task ? We have a NMR structure of the DNA with the dye but thats 20 mer. Is there a way to
cut n paste the dye to the predicted 30 mer from the NMR using any tool ? Thank you
Pages: [1]
Funded by the NIH R24GM153869 grant on X3DNA-DSSR, an NIGMS National Resource for Structural Bioinformatics of Nucleic Acids
Created and maintained by Dr. Xiang-Jun Lu, Department of Biological Sciences, Columbia University