DSSR version compatibility with SAMPDI-3Dv2 (v2.4.5 required)

[ShengzhiQian]

Hi Xiang-Jun,

Thank you for approving my 3DNA Forum account.

I am currently trying to reproduce SAMPDI-3Dv2 locally. According to the SAMPDI-3Dv2 documentation, the original implementation used x3dna-dssr v2.4.5.

In the Downloads section of the 3DNA Forum, I found DSSR v1.9.10-2020apr23 for Linux, but I could not find v2.4.5.

Could you please advise whether DSSR v1.9.10 is compatible with SAMPDI-3Dv2, or whether an archived Linux version of DSSR v2.4.5 is still available?

Thank you very much for your help.

Best regards,
Shengzhi Qian

[xiangjun]

Hi Shengzhi Qian,

Thank you for your interest in DSSR.

Starting with v2.0, Columbia University manages DSSR licensing. Columbia Technology Ventures (CTV) is the exclusive distributor for DSSR licenses. Version 1.9.10-2020apr23 is the final release available without a CTV license.

DSSR features remain consistent with the documentation provided in the 2015 DSSR and 2020 DSSR-PyMOL publications in NAR. I am not affiliated with SAMPDI-3D. To determine reproducibility, you must test v1.9.10 locally or contact the SAMPDI-3D developers for technical specifications.

Best regards,

Xiang-Jun