RNA structures (DSSR)

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Subject / Started by	Replies / Views	Last post
--nmr option with --get-hbond & --analyze Started by amirtaghavi	3 Replies 9535 Views	July 27, 2019, 10:00:53 am by xiangjun
strange exception Started by lvelve0901 « 1 2 »	25 Replies 27846 Views	July 08, 2019, 02:21:16 pm by xiangjun
Figure 6. Molecular images of multiplets with two or more modes of G·A Started by shuxiang	6 Replies 14532 Views	June 26, 2019, 01:20:18 pm by shuxiang
strange sequence and dot-bracket notation for dssr output Started by shuxiang	2 Replies 7041 Views	June 21, 2019, 03:31:57 pm by shuxiang
Figure 5. Molecular images illustrating hydrogen bonds (dashed lines) shared Started by shuxiang	1 Replies 7268 Views	June 14, 2019, 03:55:57 pm by shuxiang
Figure 4. Succession of configurations illustrating the rigid-body motions Started by shuxiang	1 Replies 6455 Views	June 14, 2019, 03:11:58 pm by shuxiang
Figure 3. Scatter plots of the rigid-body components—shear, stretch, and opening Started by shuxiang	1 Replies 6469 Views	June 10, 2019, 01:24:06 pm by shuxiang
Figure 1. Comparison of the hydrogen-bonding interactions, chemical structures Started by shuxiang	10 Replies 12177 Views	June 10, 2019, 01:05:43 pm by shuxiang
Figure 2. Molecular images of RNA secondary structural motifs incorporating each Started by shuxiang	6 Replies 10124 Views	June 10, 2019, 01:03:27 pm by shuxiang
Materials related to the DSSR ACS Biochemistry article on G.A pairs Started by xiangjun	0 Replies 6643 Views	June 07, 2019, 02:48:29 pm by xiangjun
Using dssr to analyze PDB containing multiple frames Started by jimamoto	3 Replies 9027 Views	March 08, 2019, 10:45:24 pm by xiangjun
Junction definition Started by lijun	4 Replies 11556 Views	March 07, 2019, 02:23:01 pm by lijun
no nucleotide in some structures Started by shuxiang	2 Replies 9568 Views	February 11, 2019, 11:41:21 am by shuxiang
Stems of junction structure have only one base pair Started by lijun	3 Replies 10546 Views	January 16, 2019, 01:08:16 pm by xiangjun
Stacking parameters Started by spoblete	1 Replies 10134 Views	December 27, 2018, 02:08:45 pm by xiangjun
Non canonical RNA pairs in bpseq format Started by jaswinder.singh	1 Replies 14839 Views	December 01, 2018, 09:59:40 am by xiangjun
Web 3DNA Error Started by Pierred	3 Replies 14312 Views	October 18, 2018, 01:43:45 pm by Pierred
Seeking help with DSSR (Base Pair and Stacking) Started by mahfuz	6 Replies 13506 Views	October 15, 2018, 12:29:15 pm by mahfuz
DSSR Download and Installation Started by se3DNAcct	1 Replies 10055 Views	September 26, 2018, 06:48:51 pm by xiangjun
Analysis crashes: MD trajectory of abasic site in RNA Started by Marcel Heinz	10 Replies 18442 Views	September 06, 2018, 01:48:00 pm by xiangjun

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.

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