RNA structures (DSSR)

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Subject / Started by	Replies / Views	Last post
no nucleotide in some structures Started by shuxiang	2 Replies 7021 Views	February 11, 2019, 11:41:21 am by shuxiang
strange residue number after dssr --view option Started by shuxiang	2 Replies 6062 Views	August 06, 2018, 05:40:26 pm by shuxiang
Web DSSR for dissecting the spatial structures of nucleic acids Started by shuxiang	0 Replies 7561 Views	July 29, 2018, 02:16:30 pm by shuxiang
DSSR-enhanced visualization web server cannot display ribosome structures? Started by shuxiang	4 Replies 7964 Views	May 17, 2018, 12:58:25 pm by shuxiang
How to display RNA secondary structure with & in forna? Started by shuxiang	2 Replies 7976 Views	May 15, 2018, 11:35:00 am by shuxiang
strange sequence and dot-bracket notation for dssr output Started by shuxiang	2 Replies 4400 Views	June 21, 2019, 03:31:57 pm by shuxiang
Figure 6. Molecular images of multiplets with two or more modes of G·A Started by shuxiang	6 Replies 10319 Views	June 26, 2019, 01:20:18 pm by shuxiang
Figure 5. Molecular images illustrating hydrogen bonds (dashed lines) shared Started by shuxiang	1 Replies 4632 Views	June 14, 2019, 03:55:57 pm by shuxiang
Figure 4. Succession of configurations illustrating the rigid-body motions Started by shuxiang	1 Replies 3852 Views	June 14, 2019, 03:11:58 pm by shuxiang
Figure 3. Scatter plots of the rigid-body components—shear, stretch, and opening Started by shuxiang	1 Replies 3862 Views	June 10, 2019, 01:24:06 pm by shuxiang
Figure 2. Molecular images of RNA secondary structural motifs incorporating each Started by shuxiang	6 Replies 5501 Views	June 10, 2019, 01:03:27 pm by shuxiang
Figure 1. Comparison of the hydrogen-bonding interactions, chemical structures Started by shuxiang	10 Replies 6831 Views	June 10, 2019, 01:05:43 pm by shuxiang
Analysis of trajectory from Molecular Dynamics Started by shvelarde	3 Replies 4278 Views	July 08, 2020, 02:55:19 pm by xiangjun
A pair is absent in dot-bracket notation ? Started by sk	2 Replies 1354 Views	November 25, 2023, 12:01:52 am by xiangjun
Single-Stranded Based Zp Parameter Started by slaw	5 Replies 13249 Views	April 19, 2012, 06:05:44 pm by slaw
DSSR could not install in my computor Started by songinhyun	3 Replies 8301 Views	February 03, 2015, 11:54:07 am by xiangjun
Color each block nucleotide at each locations Started by spark159	13 Replies 11242 Views	July 23, 2021, 06:17:33 pm by xiangjun
Stacking parameters Started by spoblete	1 Replies 7564 Views	December 27, 2018, 02:08:45 pm by xiangjun
Stacking parameters (again) Started by spoblete	1 Replies 5069 Views	August 27, 2019, 10:31:45 pm by xiangjun
Removing some nucleotides and fixing/reducing the loop in my RNA structure Started by Sruthi0412	2 Replies 7786 Views	July 20, 2021, 06:21:06 am by Sruthi0412

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.

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