Topics

1

General discussions (Q&As) / base/nucleotide recognition

« on: February 28, 2018, 02:19:12 pm »

I would like to ask how to adjust the recognition parameters as I'm running into problems with x3dna and dssr "missing" a TA base pair (x3DNA) and a T nucleotide (DSSR) in a small distorted DNA complex whose geometry was obtained by an ab initio calculation. I think it might have to do with the lack of planarity.