slide.csv |
2390 |
Ruby scripts for the analysis of MD simulation trajectories |
January 19, 2011, 12:11:44 am |
propeller.tsv |
2417 |
Ruby scripts for the analysis of MD simulation trajectories |
January 19, 2011, 12:11:44 am |
x3dna_md.out |
2360 |
Ruby scripts for the analysis of MD simulation trajectories |
January 19, 2011, 12:11:44 am |
fiber31_Hoogsteen.pdb |
1958 |
Re: building a parallel stranded DNA |
September 07, 2011, 12:42:16 pm |
buckle.tsv |
2021 |
Re: H-bonding information in MD analysis output |
September 30, 2011, 10:17:44 am |
hbond.tsv |
1996 |
Re: H-bonding information in MD analysis output |
September 30, 2011, 10:17:44 am |
K19.png |
2429 |
Re: PNA-DNA duplex study using 3DNA |
November 26, 2011, 10:06:26 am |
no1014-missing-bp.png |
2606 |
Re: Problem of finding all base pairs in distorted DNA structure using 3DNA |
January 05, 2012, 06:21:52 pm |
EnergyPDNA.C |
2466 |
Re: deformation energy calculation program |
January 07, 2012, 11:49:30 pm |
EnergyParams.h |
2398 |
Re: deformation energy calculation program |
January 07, 2012, 11:49:30 pm |
normal_10ns.out |
2058 |
Re: Interpretation of Analysis data from 3DNA |
February 27, 2012, 05:38:36 pm |
modified.out |
2049 |
Re: Interpretation of Analysis data from 3DNA |
February 27, 2012, 05:38:36 pm |
AAACCCAAA-three.pdb |
2498 |
Re: haddock compatible pdb |
March 05, 2012, 11:43:20 am |
AAACCCAAA-three-connect.pdb |
2528 |
Re: haddock compatible pdb |
March 05, 2012, 11:43:20 am |
problem_str.png |
2790 |
Re: Analysis of PDB file |
April 07, 2012, 09:21:16 am |
1aju-m5-frag.png |
2736 |
Re: Helices and Isolates in output of find_pair |
July 13, 2012, 05:28:10 pm |
1z58_helix_336-338_346-348.png |
2756 |
Re: Helices and Isolates in output of find_pair |
July 15, 2012, 09:36:07 am |
hairpin-loop-question.png |
2654 |
Re: Question on hairpin-loop in PDB entry 3uzn |
July 20, 2012, 09:54:50 am |
G-tetrad.png |
3189 |
How to identify triplets, quadruplets and higher-order base associations |
August 16, 2012, 11:48:16 pm |
oct.png |
3225 |
How to identify triplets, quadruplets and higher-order base associations |
August 16, 2012, 11:48:16 pm |
A-tetrad.png |
3224 |
How to identify triplets, quadruplets and higher-order base associations |
August 16, 2012, 11:48:16 pm |
incl_xdsp.png |
3608 |
Re: Datasets and scripts for reproducing Figure 5 of the 3DNA NAR03 paper |
September 07, 2012, 02:15:17 pm |
roll_slide.png |
3654 |
Re: Datasets and scripts for reproducing Figure 5 of the 3DNA NAR03 paper |
September 07, 2012, 02:15:17 pm |
zph_zp.png |
3608 |
Re: Datasets and scripts for reproducing Figure 5 of the 3DNA NAR03 paper |
September 07, 2012, 02:15:17 pm |
A-base-pair.dat |
2167 |
Data files for Table 3 of the standard base-reference frame article |
September 18, 2012, 10:32:15 pm |