slide.csv |
2365 |
Ruby scripts for the analysis of MD simulation trajectories |
January 19, 2011, 12:11:44 am |
propeller.tsv |
2392 |
Ruby scripts for the analysis of MD simulation trajectories |
January 19, 2011, 12:11:44 am |
x3dna_md.out |
2340 |
Ruby scripts for the analysis of MD simulation trajectories |
January 19, 2011, 12:11:44 am |
fiber31_Hoogsteen.pdb |
1933 |
Re: building a parallel stranded DNA |
September 07, 2011, 12:42:16 pm |
buckle.tsv |
1999 |
Re: H-bonding information in MD analysis output |
September 30, 2011, 10:17:44 am |
hbond.tsv |
1971 |
Re: H-bonding information in MD analysis output |
September 30, 2011, 10:17:44 am |
K19.png |
2401 |
Re: PNA-DNA duplex study using 3DNA |
November 26, 2011, 10:06:26 am |
no1014-missing-bp.png |
2572 |
Re: Problem of finding all base pairs in distorted DNA structure using 3DNA |
January 05, 2012, 06:21:52 pm |
EnergyPDNA.C |
2444 |
Re: deformation energy calculation program |
January 07, 2012, 11:49:30 pm |
EnergyParams.h |
2373 |
Re: deformation energy calculation program |
January 07, 2012, 11:49:30 pm |
normal_10ns.out |
2020 |
Re: Interpretation of Analysis data from 3DNA |
February 27, 2012, 05:38:36 pm |
modified.out |
2022 |
Re: Interpretation of Analysis data from 3DNA |
February 27, 2012, 05:38:36 pm |
AAACCCAAA-three.pdb |
2467 |
Re: haddock compatible pdb |
March 05, 2012, 11:43:20 am |
AAACCCAAA-three-connect.pdb |
2505 |
Re: haddock compatible pdb |
March 05, 2012, 11:43:20 am |
problem_str.png |
2758 |
Re: Analysis of PDB file |
April 07, 2012, 09:21:16 am |
1aju-m5-frag.png |
2697 |
Re: Helices and Isolates in output of find_pair |
July 13, 2012, 05:28:10 pm |
1z58_helix_336-338_346-348.png |
2711 |
Re: Helices and Isolates in output of find_pair |
July 15, 2012, 09:36:07 am |
hairpin-loop-question.png |
2618 |
Re: Question on hairpin-loop in PDB entry 3uzn |
July 20, 2012, 09:54:50 am |
A-tetrad.png |
3179 |
How to identify triplets, quadruplets and higher-order base associations |
August 16, 2012, 11:48:16 pm |
G-tetrad.png |
3139 |
How to identify triplets, quadruplets and higher-order base associations |
August 16, 2012, 11:48:16 pm |
oct.png |
3183 |
How to identify triplets, quadruplets and higher-order base associations |
August 16, 2012, 11:48:16 pm |
incl_xdsp.png |
3559 |
Re: Datasets and scripts for reproducing Figure 5 of the 3DNA NAR03 paper |
September 07, 2012, 02:15:17 pm |
roll_slide.png |
3609 |
Re: Datasets and scripts for reproducing Figure 5 of the 3DNA NAR03 paper |
September 07, 2012, 02:15:17 pm |
zph_zp.png |
3561 |
Re: Datasets and scripts for reproducing Figure 5 of the 3DNA NAR03 paper |
September 07, 2012, 02:15:17 pm |
A-base-pair.dat |
2145 |
Data files for Table 3 of the standard base-reference frame article |
September 18, 2012, 10:32:15 pm |