Messages

1

RNA structures (DSSR) / Re: Web 3DNA Error

« on: October 18, 2018, 01:43:45 pm »

Perfect!

Thank you for your quick replies. It works really well with DSSR.

Replacing the "A3" residues to "A" also works on the web 3DNA interface.

2

RNA structures (DSSR) / Web 3DNA Error

« on: October 18, 2018, 11:29:04 am »

Hi,

I'm a very new user. I'd like to use 3DNA as a tool to analyze RNA structures after they have undergone MD simulations.

As a quick test, I tried to analyze a pdb from my trajectory on the web interface Web 3DNA, but I get the following error: "Loading...Please wait. unable to open file pdbid.inps"

Do any of you know what I'm doing wrong? Is there anything I can modify in the pdb itself to make the analysis work?

Thank you for your help.