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Topics - Shreya Ghosh

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General discussions (Q&As) / Generating PDB file
« on: April 18, 2020, 07:29:47 pm »
After creating a .par file, I tried to create a pdb.

I used the BuildNucleicAcids.py function and mentioned the DNA type and other details. It generated a pdb file without the DNA backbone atoms (attached image).

Could you please let me know how to generate a proper pdb file with the appropriate DNA backbone atoms?

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.