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General discussions (Q&As) / mutations to 3-methyladenine
« on: October 28, 2018, 12:00:42 pm »
Hello,

I am a new user for the 3DNA program, and my interests are about the study of the 3-methyladenine.

I have looked through the topic of 'How can I mutate cytosine to 5-methylcytosine' and processed the adenine to 3-methyladenine according the protocol for mutation the cytosine. Unfortunately, it is unavailable and the notification was listed as following:

unrecognized mutation: 1 A: ...7@: [ @@@] ---> *7AM*
0 out of 1 mutation entries are valid.
             No valid mutation entries -- check file 'mutations.dat'!
After reading the file 'mutations.dat', I did not find the information about the modified adenine. Hence, I want to ask if you know the method of modification adenine to 3-methyladenine?

Best wishes!

Ling-Yan

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.