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Topics - sharanr2

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RNA structures (DSSR) / Phosphodiester bond length
« on: June 09, 2016, 10:16:33 am »

I was wondering if there was a way to see phosphodiester bond lengths in the backbone of an RNA structure? The closest I have found is the Dp field in the dssr-torsion.txt file, however, if the distance appears to be too long, it is not calculated, but a "---" is there.

Please let me know if this is possible or if you need more information/examples. Thank you.

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The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.