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MD simulations / analysis of new bases
« on: April 17, 2015, 09:17:48 am »
i used 'analyze' to analyze the trajectory of my DNA molecule.
maybe because a base pair differs from the natural ones too greatly, it says that this site has no residue.(i have changed the name of the new bases in the pdb file to normal one like a 'C')
HOW can i solve it？
maybe because a base pair differs from the natural ones too greatly, it says that this site has no residue.(i have changed the name of the new bases in the pdb file to normal one like a 'C')
HOW can i solve it？