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w3DNA -- web interface to 3DNA / Missing atoms

« on: March 08, 2012, 04:09:44 pm »

Dear Xiang-Jun,

Thank you for your 3DNA software and the 3DNA Webservice.
I generated a dsDNA fragment (18-mer) through your 3DNA Webserver. When I open the file with Swiss Pdb Viewer, I got a long list complaining missing atoms. I think that the atoms are there, but they have different names which Swiss Pdb Viewer can not recognize. Is there an easy way to fix this?

Thank you.

Xiao-Ping