Messages

1

RNA structures (DSSR) / A question about DSSR

« on: November 27, 2014, 01:03:28 am »

Dear Xiang-Jun,

I encountered a problem when I used DSSR for extracting the 2D structure of 3ZEX from its pdb file.

I issued the following command:
x3dna-dssr -i=3ZEX.pdb -o=3ZEX.dssr

Then I found that the '3ZEX.pdb' file contains totally 4200 nucleotides, while the '3ZEX.dssr' file concerns only 4177 nucleotides.

Thanks in advance!

Best regards
Jian