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Topics - lukeczapla

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General discussions (Q&As) / buggy rebuild
« on: June 23, 2017, 01:44:45 pm »
I tried to rebuild this structure (base-pair step parameters) and it comes out as junk.  The first base-pair is not even in the standard reference frame near the origin.  It does this in both v2.1 and v2.3.

command:

rebuild -atomic structure-5000bp-ID0-B0-1.dat out.pdb


Thanks
Luke Czapla

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Funded by the NIH R24GM153869 grant on X3DNA-DSSR, an NIGMS National Resource for Structural Bioinformatics of Nucleic Acids

Created and maintained by Dr. Xiang-Jun Lu, Department of Biological Sciences, Columbia University