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Questions and answers => MD simulations => Topic started by: ara on December 13, 2013, 11:40:10 am

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Title: dna torsional angle wheels
Post by: ara on December 13, 2013, 11:40:10 am

Hi everyone,

I was wondering if anyone is aware what would be best program to plot these kind of torsional angle wheels -- http://maptest.rutgers.edu/drupal/files/oldimages/images/stories/author/nthtung/B_DNAimg/wheel.jpg

i like it as one can see all torsional angle distributions in one plot. I would like to do this for my molecular dynamics data. I have tried with gnuplot or origin but could not find a way to do that. Also I know about the "Dials and Windows" program but not sure if it can do that or where to download it.

Any help is appreciated,

Thanks,

Ara

Title: Re: dna torsional angle wheels
Post by: xiangjun on December 14, 2013, 11:37:55 am

Hi Ara,

The torsion wheel images you referred to look very nice and compact. You may need to contact to original author (or the PI) of the figures for further details. In the meantime, have a look of the thread "How to make a nice visualization for angle distribution? (http://forum.x3dna.org/related-topics/how-to-make-a-nice-visualization-for-angle-distribution/)".

Xiang-Jun

Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.