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Sir,
is there any way i could extract the stacked base overlap area as a function of time?
could i extract overlap area in analysis o/p
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Will the Ruby script x3dna_ensemble distributed with 3DNA do the trick?
Alternatively, you may want to get do_x3dna (http://bioinformatics.oxfordjournals.org/content/early/2015/04/01/bioinformatics.btv190.abstract) a try.
HTH,
Xiang-Jun
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ok sir
Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.