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MD simulations

Topics

<< < (2/7) > >>

[1] about "curavture" and "tangent" in dnaMD

[2] local helical axis vector for strongly bent DNA

[3] How to analyze helical parameters of DNA with unnatural bases

[4] How to generate a Methylated DNA pdb file from sequence to be use in MD

[5] do_x3dna: a tool to analyze DNA/RNA in molecular dynamics trajectories

[6] Analysis of Amber .mdcrd File

[7] "Ruby in cygwin"

[8] Average or Global properties from a simulation

[9] A-Form B-Form RNA/DNA

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Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.