This section allows you to view all posts made by this member. Note that you can only see posts made in areas you currently have access to.
Netiquette · Download · News · Gallery · G-quadruplexes · DSSR-Jmol · DSSR-PyMOL
· Video Overview · DSSR v2.5.2 (DSSR Manual) · Homepage
Messages - Pierred
Pages: [1]
1
« on: October 18, 2018, 01:43:45 pm »
Perfect!
Thank you for your quick replies. It works really well with DSSR.
Replacing the "A3" residues to "A" also works on the web 3DNA interface.
2
« on: October 18, 2018, 11:29:04 am »
Hi,
I'm a very new user. I'd like to use 3DNA as a tool to analyze RNA structures after they have undergone MD simulations.
As a quick test, I tried to analyze a pdb from my trajectory on the web interface Web 3DNA, but I get the following error: "Loading...Please wait. unable to open file pdbid.inps"
Do any of you know what I'm doing wrong? Is there anything I can modify in the pdb itself to make the analysis work?
Thank you for your help.
Pages: [1]
Funded by the NIH R24GM153869 grant on X3DNA-DSSR, an NIGMS National Resource for Structural Bioinformatics of Nucleic Acids
Created and maintained by Dr. Xiang-Jun Lu, Department of Biological Sciences, Columbia University
Show Posts